Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_23320 | Not Available | Negative | 2642581 - 2643159 | 21757.1 |
| superfamily i dna and rna helicase | MSI_23330 | Not Available | Negative | 2643196 - 2644800 | 61811.6 |
| hypothetical protein | MSI_23340 | Not Available | Negative | 2644856 - 2645386 | 20091.6 |
| rod shape-determining protein roda | MSI_23360 | Not Available | Negative | 2646255 - 2647577 | 50035.8 |
| penicillin-binding protein 2 | MSI_23370 | Not Available | Negative | 2647583 - 2649454 | 69887.0 |
| rod shape-determining protein mred | MSI_23380 | Not Available | Negative | 2649447 - 2649971 | 19253.2 |
| rod shape-determining protein mrec | MSI_23390 | Not Available | Negative | 2649968 - 2650846 | 32853.7 |
| cell shape determining protein, mreb/mrl family | MSI_23400 | Not Available | Negative | 2650852 - 2651889 | 37102.6 |
| tetratricopeptide repeat-containing protein | MSI_23410 | Not Available | Negative | 2651931 - 2652881 | 36725.1 |
| zn-ribbon protein | MSI_23430 | Not Available | Negative | 2653325 - 2654257 | 35534.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
