Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl carrier protein | MSI_22890 | Not Available | Positive | 2590701 - 2590952 | 9277.05 |
| 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase | MSI_22900 | Not Available | Positive | 2591040 - 2591417 | 14220.3 |
| putative 3-hydroxylacyl-(acyl carrier protein) dehydratase | MSI_22910 | Not Available | Positive | 2591503 - 2592006 | 18789.1 |
| helix-turn-helix domain-containing protein | MSI_22920 | Not Available | Negative | 2592167 - 2592526 | 13595.2 |
| hypothetical protein | MSI_22930 | Not Available | Positive | 2592634 - 2593311 | 25647.6 |
| trna(ile)-lysidine synthetase | MSI_22960 | Not Available | Negative | 2595458 - 2596816 | 50532.7 |
| ribosomal protein l25, ctc-form | MSI_22970 | Not Available | Negative | 2596873 - 2597424 | 20020.2 |
| hypothetical protein | MSI_22980 | Not Available | Negative | 2597482 - 2599110 | 61969.1 |
| abc-type xylose transport system, periplasmic component | MSI_22990 | Not Available | Negative | 2599247 - 2602780 | 128444.0 |
| hypothetical protein | MSI_23000 | Not Available | Negative | 2602828 - 2603802 | 36186.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
