Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulator | MSI_21600 | Not Available | Negative | 2454838 - 2455677 | 31398.7 |
| integrase | MSI_21610 | Not Available | Negative | 2456006 - 2457391 | 52971.8 |
| putative transcriptional regulator | MSI_21620 | Not Available | Positive | 2457822 - 2458031 | 7805.78 |
| type i restriction-modification system methyltransferase subunit | MSI_21630 | Not Available | Positive | 2458090 - 2459655 | 59679.0 |
| bro family protein | MSI_21640 | Not Available | Positive | 2459667 - 2460542 | 33470.8 |
| restriction endonuclease s subunit | MSI_21650 | Not Available | Positive | 2460539 - 2461720 | 45090.5 |
| hypothetical protein | MSI_21660 | Not Available | Positive | 2461736 - 2462293 | 21814.2 |
| hypothetical protein | MSI_21690 | Not Available | Negative | 2463285 - 2464460 | 45515.2 |
| aaa domain-containing protein (dynein subfamily) | MSI_21700 | Not Available | Negative | 2464473 - 2465549 | 40443.8 |
| hypothetical protein | MSI_21710 | Not Available | Negative | 2465616 - 2466317 | 27742.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
