Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair exonuclease | MSI_20860 | Not Available | Positive | 2369158 - 2369988 | 32252.0 |
| histidinol phosphatase | MSI_20870 | Not Available | Positive | 2369994 - 2370734 | 29111.7 |
| protein chain release factor b | MSI_20880 | Not Available | Positive | 2370731 - 2371159 | 16257.0 |
| hypothetical protein | MSI_20890 | Not Available | Negative | 2371161 - 2371604 | 16936.5 |
| hypothetical protein | MSI_20900 | Not Available | Negative | 2371645 - 2372403 | 31029.9 |
| putative phosphatase | MSI_20910 | Not Available | Positive | 2372458 - 2373117 | 23877.7 |
| hypothetical protein | MSI_20920 | Not Available | Negative | 2373582 - 2373818 | 8335.92 |
| kap family p-loop domain-containing protein | MSI_20930 | Not Available | Negative | 2374239 - 2375663 | 55473.9 |
| type i site-specific deoxyribonuclease, hsdr family | MSI_20940 | Not Available | Negative | 2375673 - 2378786 | 119417.0 |
| abi-like protein | MSI_20950 | Not Available | Negative | 2378954 - 2379889 | 37086.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
