Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyl phosphate reductase | MSI_20760 | Not Available | Positive | 2359117 - 2360364 | 44652.6 |
| glutamate 5-kinase | MSI_20770 | Not Available | Positive | 2360467 - 2361264 | 28884.7 |
| pyrroline-5-carboxylate reductase | MSI_20780 | Not Available | Positive | 2361315 - 2362106 | 27522.7 |
| hrpa-like helicase | MSI_20790 | Not Available | Negative | 2362123 - 2363157 | 39227.8 |
| hrpa-like helicase | MSI_20800 | Not Available | Negative | 2363226 - 2364629 | 51223.2 |
| amino-acid n-acetyltransferase | MSI_20810 | Not Available | Positive | 2364667 - 2365977 | 48071.0 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_20820 | Not Available | Negative | 2365995 - 2367158 | 44774.7 |
| polyphosphate:nucleotide phosphotransferase, ppk2 family | MSI_20830 | Not Available | Negative | 2367162 - 2368034 | 34110.5 |
| hypothetical protein | MSI_20840 | Not Available | Positive | 2368501 - 2368662 | 5939.17 |
| putative transcriptional regulator | MSI_20850 | Not Available | Positive | 2368628 - 2368957 | 12225.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
