Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_20440 | Not Available | Positive | 2316382 - 2317065 | 25283.2 |
| hypothetical protein | MSI_20450 | Not Available | Positive | 2317065 - 2319125 | 76324.7 |
| nucleotidyltransferase/dna polymerase involved in dna repair | MSI_20460 | Not Available | Negative | 2319184 - 2325138 | 221444.0 |
| hypothetical protein | MSI_20480 | Not Available | Positive | 2326427 - 2330845 | 163667.0 |
| outer membrane protein assembly complex, yaet protein | MSI_20490 | Not Available | Positive | 2330885 - 2333344 | 93052.9 |
| outer membrane protein | MSI_20500 | Not Available | Positive | 2333379 - 2333906 | 19937.7 |
| dna mismatch repair protein muts | MSI_20510 | Not Available | Positive | 2333906 - 2336548 | 99077.1 |
| putative amidophosphoribosyltransferase | MSI_20520 | Not Available | Positive | 2336812 - 2337357 | 20824.7 |
| chemotaxis signal transduction protein | MSI_20530 | Not Available | Positive | 2337492 - 2337971 | 17947.0 |
| putative pyridoxal phosphate-dependent enzyme involved in regulation of cell wall biogenesis | MSI_20540 | Not Available | Positive | 2337971 - 2339026 | 38581.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
