Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | MSI_00100 | Not Available | + | 8563 - 9345 | 28335.5 |
| pantoate--beta-alanine ligase | MSI_00110 | Not Available | + | 9455 - 10210 | 28190.2 |
| phosphopantothenoylcysteine synthetase/decarboxylase | MSI_00120 | Not Available | + | 10408 - 10947 | 19131.2 |
| phosphopantothenoylcysteine synthetase/decarboxylase | MSI_00130 | Not Available | + | 11142 - 11819 | 24227.0 |
| pantothenate kinase, type iii | MSI_00140 | Not Available | + | 11816 - 12583 | 27629.7 |
| l-aspartate-alpha-decarboxylase | MSI_00150 | Not Available | + | 12685 - 13038 | 12807.4 |
| putative dna alkylation repair enzyme | MSI_00160 | Not Available | + | 13055 - 13765 | 27644.1 |
| putative periplasmic protein (duf2271) | MSI_00170 | Not Available | - | 13770 - 14393 | 22837.1 |
| nadph-dependent fmn reductase | MSI_00180 | Not Available | - | 14390 - 14944 | 20169.9 |
| transcriptional regulator | MSI_00190 | Not Available | - | 14941 - 15531 | 22205.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
