Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sporulation and spore germination protein | MSI_20030 | Not Available | Negative | 2275609 - 2276067 | 17529.6 |
| n-acetylmuramoyl-l-alanine amidase | MSI_20040 | Not Available | Negative | 2276070 - 2277104 | 38333.3 |
| biotin carboxylase | MSI_20050 | Not Available | Negative | 2277113 - 2278741 | 59236.0 |
| hypothetical protein | MSI_20060 | Not Available | Negative | 2278772 - 2280871 | 78945.9 |
| hypothetical protein | MSI_20070 | Not Available | Negative | 2280868 - 2281239 | 13959.1 |
| hypothetical protein | MSI_20080 | Not Available | Negative | 2281236 - 2282192 | 36859.2 |
| hypothetical protein | MSI_20090 | Not Available | Negative | 2282167 - 2283741 | 58610.6 |
| exodeoxyribonuclease vii, large subunit | MSI_20100 | Not Available | Positive | 2283828 - 2285063 | 45104.5 |
| exonuclease vii small subunit | MSI_20110 | Not Available | Positive | 2285073 - 2285354 | 10348.3 |
| dna mismatch repair protein mutl | MSI_20120 | Not Available | Positive | 2285351 - 2287240 | 69190.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
