Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_18170 | Not Available | Negative | 2072196 - 2072534 | 13095.2 |
| hypothetical protein | MSI_18180 | Not Available | Negative | 2072473 - 2072976 | 18693.3 |
| metalloendopeptidase-like membrane protein | MSI_18190 | Not Available | Positive | 2073174 - 2074199 | 37947.4 |
| integral membrane protein ccma involved in cell shape determination | MSI_18200 | Not Available | Positive | 2074206 - 2074616 | 14394.3 |
| hypothetical protein | MSI_18210 | Not Available | Positive | 2074616 - 2075185 | 21275.3 |
| hypothetical protein | MSI_18220 | Not Available | Positive | 2075220 - 2076137 | 35055.2 |
| hypothetical protein | MSI_18230 | Not Available | Positive | 2076211 - 2076951 | 28513.5 |
| prolyl-trna synthetase, family ii | MSI_18240 | Not Available | Positive | 2077023 - 2078837 | 66767.0 |
| hypothetical protein | MSI_18250 | Not Available | Positive | 2078930 - 2080000 | 41311.5 |
| sporulation and spore germination protein | MSI_18260 | Not Available | Negative | 2080107 - 2081042 | 34246.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
