Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_01700 | Not Available | Positive | 209365 - 210507 | 41908.6 |
| collagenase | MSI_01710 | Not Available | Positive | 210551 - 212839 | 85304.3 |
| single stranded dna-binding protein (ssb) | MSI_01720 | Not Available | Negative | 212836 - 213273 | 16391.1 |
| hypothetical protein | MSI_01730 | Not Available | Negative | 213476 - 214885 | 54596.4 |
| hypothetical protein | MSI_01740 | Not Available | Negative | 214869 - 215375 | 18990.5 |
| valyl-trna synthetase | MSI_01750 | Not Available | Positive | 215439 - 218189 | 104591.0 |
| hypothetical protein | MSI_01760 | Not Available | Positive | 218241 - 218879 | 24770.9 |
| hypothetical protein | MSI_01770 | Not Available | Negative | 218880 - 221168 | 84793.8 |
| hypothetical protein | MSI_01780 | Not Available | Negative | 221198 - 221518 | 12040.0 |
| hypothetical protein (putative transposase or invertase) | MSI_01790 | Not Available | Positive | 221951 - 222973 | 38250.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
