Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent protease la | MSI_17250 | Not Available | Positive | 1990098 - 1992551 | 91431.5 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 | MSI_17260 | Not Available | Positive | 1992576 - 1993223 | 24236.1 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_17270 | Not Available | Negative | 1993218 - 1994435 | 47370.7 |
| putative redox-active protein | MSI_17280 | Not Available | Positive | 1994528 - 1994908 | 13187.0 |
| hypothetical protein | MSI_17290 | Not Available | Negative | 1994943 - 1995545 | 21544.7 |
| type iia topoisomerase (dna gyrase/topo ii, topoisomerase iv), a subunit | MSI_17300 | Not Available | Negative | 1995545 - 1997485 | 73509.3 |
| ribosome small subunit-dependent gtpase a | MSI_17310 | Not Available | Positive | 1997771 - 1998757 | 36807.9 |
| mismatch repair atpase (muts family) | MSI_17320 | Not Available | Positive | 1998783 - 2001371 | 95023.0 |
| cyclopropane fatty acid synthase | MSI_17330 | Not Available | Positive | 2001596 - 2002363 | 28576.7 |
| carboxylesterase type b | MSI_17340 | Not Available | Negative | 2002461 - 2004053 | 59208.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
