Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_17040 | Not Available | Positive | 1971009 - 1971128 | 4175.92 |
| hypothetical protein | MSI_17050 | Not Available | Positive | 1971192 - 1971335 | 5681.94 |
| hypothetical protein | MSI_17060 | Not Available | Positive | 1971401 - 1971508 | 4175.0 |
| hypothetical protein | MSI_17070 | Not Available | Positive | 1972430 - 1972699 | 10394.1 |
| crispr-associated endonuclease cas1, subtype ii/nmeni | MSI_17090 | Not Available | Negative | 1973300 - 1974049 | 28145.2 |
| crispr-associated protein cas9/csn1, subtype ii/nmemi | MSI_17100 | Not Available | Negative | 1974266 - 1977454 | 122397.0 |
| hypothetical protein | MSI_17110 | Not Available | Negative | 1977664 - 1978209 | 21869.8 |
| Trna-arg | Not Available | Not Available | Positive | 1978264 - 1978338 | Not Available |
| suf system fes assembly protein, nifu family | MSI_17130 | Not Available | Negative | 1978364 - 1978801 | 16047.3 |
| cysteine desulfurase, sufs subfamily | MSI_17140 | Not Available | Negative | 1978896 - 1980137 | 45569.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
