Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | MSI_16840 | Not Available | Negative | 1943212 - 1944186 | 36701.8 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | MSI_16850 | Not Available | Positive | 1944241 - 1946529 | 86527.7 |
| putative membrane protein | MSI_16860 | Not Available | Negative | 1946542 - 1947423 | 32157.2 |
| acetyl-coa carboxylase, carboxyltransferase component (alpha and beta subunits) | MSI_16870 | Not Available | Negative | 1947624 - 1949114 | 54397.2 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_16880 | Not Available | Negative | 1949428 - 1950867 | 54812.2 |
| hypothetical protein | MSI_16890 | Not Available | Negative | 1950920 - 1952593 | 61890.7 |
| hflc protein | MSI_16900 | Not Available | Negative | 1952605 - 1953594 | 37714.5 |
| hflk protein | MSI_16910 | Not Available | Negative | 1953617 - 1954585 | 36173.4 |
| hypothetical protein | MSI_16920 | Not Available | Positive | 1954689 - 1955378 | 25855.9 |
| abc-type multidrug transport system, atpase and permease component | MSI_16930 | Not Available | Positive | 1955371 - 1957131 | 64542.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
