Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar biosynthesis/type iii secretory pathway protein | MSI_16630 | Not Available | Positive | 1918734 - 1919666 | 34837.4 |
| atpase flii/yscn family | MSI_16640 | Not Available | Positive | 1919685 - 1921115 | 51306.5 |
| hypothetical protein | MSI_16650 | Not Available | Positive | 1921102 - 1921536 | 16777.3 |
| ribosomal protein l13, bacterial type | MSI_16670 | Not Available | Positive | 1923414 - 1923842 | 15631.1 |
| ribosomal protein s9 | MSI_16680 | Not Available | Positive | 1923858 - 1924250 | 14410.5 |
| flagellar motor switch protein | MSI_16690 | Not Available | Positive | 1924344 - 1925783 | 53798.4 |
| putative zn-dependent peptidase | MSI_16700 | Not Available | Positive | 1925803 - 1928817 | 113880.0 |
| hypothetical protein | MSI_16710 | Not Available | Positive | 1928869 - 1929087 | 8346.08 |
| hypothetical protein | MSI_16720 | Not Available | Positive | 1929189 - 1930361 | 44328.4 |
| atp-dependent chaperone clpb | MSI_16730 | Not Available | Positive | 1930447 - 1933035 | 95979.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
