Treponema sp. JC4

Gram-negativeSpirilla

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Spirochaetia

Order

Spirochaetales

Family

Treponemataceae

Genus

Treponema

Description

Treponema sp. JC4 is a Gram-negative bacterium characterized by its spirilla shape. This species possesses flagella, which are essential for its motility. Treponema sp. JC4 has a single replicon, indicating a streamlined genomic organization. The genomic data for this organism is available under the accession number AJGU00000000.1. The presence of flagella is notable as it suggests that Treponema sp. JC4 is likely capable of active movement in its environment, which may play a role in its ecological interactions. Being a member of the Treponema genus, it is reasonable to consider its potential involvement in specific ecological niches, possibly in anaerobic environments where many Treponema species thrive. Understanding the motility and genomic structure of Treponema sp. JC4 could provide insights into its ecological roles, particularly in anaerobic habitats. The flagella enable the organism to navigate these environments effectively, which may influence its interactions with other microorganisms and its ability to utilize available resources. Overall, the traits of Treponema sp. JC4 highlight its potential adaptability and ecological significance within its habitat.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassSpirochaetia
OrderSpirochaetales
FamilyTreponemataceae
GenusTreponema
SpeciesTreponema sp. JC4
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeSpirilla
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Treponema sp. JC4
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Treponema sp. JC4


Gene Summary

Adenine Count

891278 bp

Thymine Count

917610 bp

Guanine Count

615445 bp

Cytosine Count

607707 bp

Genome Length

3032045 bp

Protein-coding Genes

2570 genes

Non-Coding Genes

43 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pullulanase pulaMSI_16330Not AvailablePositive1881992 - 188386370122.8
hypothetical proteinMSI_16340Not AvailableNegative1883850 - 188424815196.4
sodium pump decarboxylase, gamma subunitMSI_16350Not AvailablePositive1884665 - 18849138400.6
oxaloacetate decarboxylase alpha subunitMSI_16360Not AvailablePositive1884933 - 188703273460.2
sodium ion-translocating decarboxylase, beta subunitMSI_16370Not AvailablePositive1887127 - 188856350333.5
response regulatorMSI_16380Not AvailablePositive1888662 - 189093884868.5
signal transduction histidine kinaseMSI_16390Not AvailablePositive1890975 - 1894994149253.0
hd-gyp domain-containing proteinMSI_16400Not AvailablePositive1894995 - 189726886151.9
hypothetical proteinMSI_16410Not AvailableNegative1897356 - 189818331444.5
ygit-type zinc finger domain-containing proteinMSI_16420Not AvailableNegative1898185 - 18984218717.57

Displaying genes 1611 – 1620 of 2613 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.