Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_16230 | Not Available | Negative | 1873820 - 1874518 | 25260.7 |
| ribosomal protein l21 | MSI_16240 | Not Available | Positive | 1874839 - 1875153 | 11749.3 |
| ribosomal protein l27 | MSI_16250 | Not Available | Positive | 1875169 - 1875423 | 8929.63 |
| putative chitosanase | MSI_16260 | Not Available | Positive | 1875525 - 1876652 | 40803.1 |
| nicotinate (nicotinamide) nucleotide adenylyltransferase | MSI_16270 | Not Available | Positive | 1876677 - 1877360 | 25688.2 |
| putative hd superfamily hydrolase of nad metabolism | MSI_16280 | Not Available | Positive | 1877365 - 1877949 | 22151.6 |
| transcriptional regulator | MSI_16290 | Not Available | Positive | 1877949 - 1879157 | 45446.9 |
| iojap-like ribosome-associated protein | MSI_16300 | Not Available | Positive | 1879186 - 1879542 | 13644.2 |
| hypothetical protein | MSI_16310 | Not Available | Negative | 1879648 - 1879953 | 11952.4 |
| signal transduction histidine kinase | MSI_16320 | Not Available | Positive | 1880084 - 1881907 | 68015.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
