Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_15820 | Not Available | Negative | 1817304 - 1817528 | 8348.19 |
| hypothetical protein | MSI_15830 | Not Available | Negative | 1818112 - 1818735 | 22703.7 |
| phenylalanyl-trna synthetase, beta subunit | MSI_15840 | Not Available | Positive | 1818856 - 1821168 | 85348.2 |
| hypothetical protein | MSI_15850 | Not Available | Negative | 1821224 - 1821736 | 19837.7 |
| hypothetical protein | MSI_15860 | Not Available | Negative | 1821807 - 1822904 | 43276.6 |
| kila-n domain-containing protein | MSI_15870 | Not Available | Negative | 1822971 - 1823786 | 31214.4 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_15880 | Not Available | Negative | 1823844 - 1824869 | 39680.4 |
| rare lipoprotein a | MSI_15890 | Not Available | Negative | 1824940 - 1825689 | 26911.3 |
| arac-type dna-binding domain-containing protein | MSI_15900 | Not Available | Positive | 1825797 - 1826675 | 34307.2 |
| putative trab pheromone shutdown family protein | MSI_15910 | Not Available | Negative | 1826706 - 1827890 | 42528.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
