Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_14710 | Not Available | Positive | 1694536 - 1695201 | 25729.4 |
| trna (guanine-n(7)-)-methyltransferase | MSI_14720 | Not Available | Positive | 1695217 - 1695990 | 29764.5 |
| dna ligase, nad-dependent | MSI_14730 | Not Available | Positive | 1696173 - 1697945 | 65518.6 |
| hypothetical protein | MSI_14740 | Not Available | Negative | 1697942 - 1698565 | 23698.7 |
| metalloendopeptidase-like membrane protein | MSI_14750 | Not Available | Negative | 1698593 - 1699573 | 36647.8 |
| single-stranded-dna-specific exonuclease recj | MSI_14760 | Not Available | Negative | 1699610 - 1701757 | 80642.7 |
| dna repair protein reco | MSI_14770 | Not Available | Negative | 1701761 - 1702591 | 31315.5 |
| dna-directed rna polymerase, subunit k/omega | MSI_14780 | Not Available | Positive | 1702606 - 1702803 | 7632.12 |
| trna dimethylallyltransferase | MSI_14790 | Not Available | Positive | 1702809 - 1703780 | 36620.2 |
| 1-deoxy-d-xylulose-5-phosphate synthase | MSI_14800 | Not Available | Positive | 1703999 - 1705897 | 69775.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
