Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative endoribonuclease l-psp | MSI_14090 | Not Available | Positive | 1624074 - 1624445 | 13139.8 |
| cell wall-associated hydrolase (invasion-associated protein) | MSI_14100 | Not Available | Negative | 1624448 - 1624987 | 20438.4 |
| hypothetical protein | MSI_14110 | Not Available | Negative | 1625260 - 1625721 | 17135.9 |
| trax protein | MSI_14120 | Not Available | Positive | 1625948 - 1626691 | 28334.6 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_14130 | Not Available | Negative | 1626779 - 1628452 | 65056.8 |
| hypothetical protein | MSI_14140 | Not Available | Negative | 1628504 - 1629397 | 34411.0 |
| flagellar biosynthesis pathway, component flha | MSI_14160 | Not Available | Positive | 1630791 - 1631207 | 16208.8 |
| flagellar biosynthesis pathway, component flha | MSI_14170 | Not Available | Positive | 1631320 - 1631874 | 21467.3 |
| hypothetical protein | MSI_14180 | Not Available | Negative | 1631924 - 1632409 | 19436.9 |
| hypothetical protein | MSI_14190 | Not Available | Positive | 1632592 - 1633755 | 46444.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
