Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | MSI_01300 | Not Available | Positive | 141258 - 142358 | 40877.6 |
| ribosomal protein s12 methylthiotransferase rimo | MSI_01310 | Not Available | Positive | 142351 - 143781 | 52602.9 |
| superfamily i dna and rna helicase | MSI_01320 | Not Available | Positive | 143791 - 146064 | 84918.8 |
| amino acid carrier protein | MSI_01330 | Not Available | Negative | 146166 - 147596 | 50770.0 |
| rna polymerase sigma factor, sigma-70 family | MSI_01340 | Not Available | Negative | 147821 - 148660 | 32045.8 |
| inorganic pyrophosphatase/exopolyphosphatase | MSI_01350 | Not Available | Negative | 149060 - 150715 | 61607.8 |
| signal transduction histidine kinase | MSI_01360 | Not Available | Positive | 150824 - 153565 | 102927.0 |
| recg-like helicase | MSI_01370 | Not Available | Negative | 153572 - 155755 | 81343.7 |
| yggt family | MSI_01380 | Not Available | Negative | 155759 - 156352 | 21726.3 |
| dna-directed dna polymerase iii (polc) | MSI_01390 | Not Available | Negative | 156349 - 160077 | 139842.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
