Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | MSI_12660 | Not Available | Positive | 1473447 - 1474226 | 28922.7 |
| hypothetical protein | MSI_12670 | Not Available | Negative | 1474232 - 1475401 | 43231.4 |
| peptidase family s41 | MSI_12680 | Not Available | Negative | 1475426 - 1477504 | 77198.0 |
| peptidase family s41 | MSI_12690 | Not Available | Negative | 1477540 - 1479552 | 75958.8 |
| cytidylate kinase | MSI_12700 | Not Available | Positive | 1479852 - 1480484 | 23279.0 |
| ribosomal protein s1 | MSI_12710 | Not Available | Positive | 1480498 - 1482204 | 63304.9 |
| response regulator | MSI_12720 | Not Available | Positive | 1482312 - 1483217 | 33434.0 |
| hypothetical protein | MSI_12730 | Not Available | Positive | 1483245 - 1483922 | 24100.4 |
| hypothetical protein | MSI_12740 | Not Available | Positive | 1483953 - 1484723 | 28414.8 |
| short-chain alcohol dehydrogenase of unknown specificity | MSI_12750 | Not Available | Negative | 1484720 - 1485565 | 31072.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
