Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine synthase a | MSI_12160 | Not Available | Negative | 1420461 - 1421399 | 32343.0 |
| Trna-pro | Not Available | Not Available | Positive | 1421622 - 1421694 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 1422041 - 1422117 | Not Available |
| consvered hypothetical protein | MSI_12190 | Not Available | Positive | 1422251 - 1422868 | 23187.7 |
| abc-type dipeptide transport system, periplasmic component | MSI_12200 | Not Available | Positive | 1422955 - 1424781 | 70070.5 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_12210 | Not Available | Positive | 1424826 - 1426502 | 64430.2 |
| hypothetical protein | MSI_12220 | Not Available | Positive | 1426524 - 1427039 | 19448.3 |
| abc-type dipeptide/oligopeptide/nickel transport system, permease component | MSI_12230 | Not Available | Positive | 1427185 - 1427625 | 16353.6 |
| abc-type dipeptide/oligopeptide/nickel transport system, atpase component | MSI_12240 | Not Available | Positive | 1427635 - 1429686 | 75774.4 |
| oligopeptide/dipeptide abc transporter, atp-binding protein | MSI_12250 | Not Available | Positive | 1429688 - 1430647 | 36096.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
