Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycyl-trna synthetase, dimeric type | MSI_11840 | Not Available | Negative | 1390133 - 1391614 | 57661.0 |
| hypothetical protein | MSI_11850 | Not Available | Negative | 1391696 - 1392628 | 35624.0 |
| pp_01155 | MSI_11860 | Not Available | Negative | 1392650 - 1393645 | Not Available |
| adenylate cyclase, class 2 (thermophilic) | MSI_11870 | Not Available | Positive | 1393668 - 1394270 | 23221.4 |
| anti-anti-sigma factor | MSI_11880 | Not Available | Negative | 1394263 - 1394562 | 10600.9 |
| putative integral membrane protein | MSI_11890 | Not Available | Positive | 1394653 - 1395396 | 28541.3 |
| signal peptide peptidase sppa, 36k type | MSI_11900 | Not Available | Positive | 1395389 - 1396405 | 37690.2 |
| putative n6-adenine-specific dna methylase | MSI_11910 | Not Available | Negative | 1396406 - 1397215 | 30722.5 |
| hypothetical protein | MSI_11920 | Not Available | Negative | 1397208 - 1397393 | 6981.21 |
| translation initiation factor if-3 | MSI_11930 | Not Available | Positive | 1397545 - 1398084 | 20391.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
