Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chemotaxis protein histidine kinase | MSI_11630 | Not Available | Negative | 1362859 - 1365393 | 90708.7 |
| hypothetical protein | MSI_11640 | Not Available | Positive | 1365568 - 1366779 | 45020.0 |
| ll-diaminopimelate aminotransferase | MSI_11650 | Not Available | Negative | 1366938 - 1368161 | 44521.9 |
| dihydrodipicolinate reductase | MSI_11660 | Not Available | Negative | 1368189 - 1368971 | 27904.4 |
| aspartate kinase | MSI_11670 | Not Available | Positive | 1369106 - 1370431 | 47637.3 |
| dj-1 family protein | MSI_11680 | Not Available | Positive | 1370440 - 1371027 | 21304.5 |
| hydroxyethylthiazole kinase, sugar kinase family | MSI_11700 | Not Available | Positive | 1371254 - 1372075 | 28883.7 |
| thiamine-phosphate pyrophosphorylase | MSI_11710 | Not Available | Positive | 1372062 - 1372712 | 23541.5 |
| haloacid dehalogenase superfamily, subfamily ia, variant 3 | MSI_11720 | Not Available | Positive | 1372709 - 1373383 | 25566.4 |
| phosphomethylpyrimidine kinase | MSI_11730 | Not Available | Positive | 1373445 - 1374236 | 27612.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
