Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mn-dependent transcriptional regulator | MSI_11430 | Not Available | Positive | 1343308 - 1343679 | 14135.9 |
| hypothetical protein | MSI_11440 | Not Available | Negative | 1343689 - 1344258 | 21303.7 |
| ggdef domain/eal domain-containing protein | MSI_11450 | Not Available | Negative | 1344360 - 1345733 | 53689.5 |
| dna polymerase iii, epsilon subunit | MSI_11460 | Not Available | Negative | 1345792 - 1346664 | 33619.3 |
| sulfate permease | MSI_11470 | Not Available | Positive | 1346767 - 1348803 | 73423.2 |
| 3-isopropylmalate dehydrogenase | MSI_11480 | Not Available | Negative | 1348921 - 1350012 | 39364.5 |
| 2-isopropylmalate synthase/homocitrate synthase family protein | MSI_11490 | Not Available | Negative | 1350235 - 1351839 | 59170.9 |
| arac-type dna-binding domain-containing protein | MSI_11500 | Not Available | Negative | 1352101 - 1352841 | 28436.2 |
| cation transport atpase | MSI_11510 | Not Available | Positive | 1352993 - 1353211 | 8161.86 |
| heavy metal-(cd/co/hg/pb/zn)-translocating p-type atpase | MSI_11520 | Not Available | Positive | 1353255 - 1355156 | 68541.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
