Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybey/upf0054 family metalloprotein | MSI_11210 | Not Available | Positive | 1317336 - 1317815 | 18259.4 |
| cbs domain-containing protein | MSI_11220 | Not Available | Positive | 1317812 - 1318603 | 30101.7 |
| tfp pilus assembly protein pilf | MSI_11230 | Not Available | Positive | 1318581 - 1320662 | 78152.8 |
| hypothetical protein | MSI_11240 | Not Available | Negative | 1320815 - 1321687 | 33244.1 |
| peptide chain release factor 2 | MSI_11250 | Not Available | Positive | 1321908 - 1322879 | 36745.2 |
| hypothetical protein | MSI_11260 | Not Available | Positive | 1322863 - 1324683 | 69217.0 |
| signal recognition particle-docking protein ftsy | MSI_11270 | Not Available | Positive | 1324680 - 1325549 | 31564.0 |
| hypothetical protein | MSI_11280 | Not Available | Positive | 1325524 - 1326462 | 37256.6 |
| abc-type transport system, involved in lipoprotein release, permease component | MSI_11290 | Not Available | Positive | 1326449 - 1327816 | 50568.7 |
| abc-type antimicrobial peptide transport system, atpase component | MSI_11300 | Not Available | Positive | 1327809 - 1328507 | 25119.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
