Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ammonium transporter | MSI_10290 | Not Available | Negative | 1199890 - 1201587 | 59953.4 |
| putative glutamine synthetase family protein | MSI_10300 | Not Available | Negative | 1201722 - 1203827 | 77975.4 |
| ctp synthase | MSI_10310 | Not Available | Positive | 1204157 - 1205782 | 60234.2 |
| glutamine synthetase | MSI_10320 | Not Available | Positive | 1205801 - 1206967 | 43713.4 |
| response regulator | MSI_10330 | Not Available | Positive | 1206970 - 1207536 | 21452.0 |
| superfamily ii dna and rna helicase | MSI_10340 | Not Available | Negative | 1207533 - 1209173 | 60816.7 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_10350 | Not Available | Positive | 1209382 - 1211538 | 82907.1 |
| hypothetical protein | MSI_10360 | Not Available | Negative | 1211535 - 1211831 | 11328.8 |
| cation/multidrug efflux pump | MSI_10370 | Not Available | Negative | 1211846 - 1215337 | 128373.0 |
| rnd family efflux transporter, mfp subunit | MSI_10380 | Not Available | Negative | 1215348 - 1216223 | 31157.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
