Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome-binding factor a | MSI_10190 | Not Available | Negative | 1181185 - 1181577 | 14692.8 |
| translation initiation factor if-2 | MSI_10200 | Not Available | Negative | 1181577 - 1184273 | 96783.1 |
| transcription termination factor nusa | MSI_10210 | Not Available | Negative | 1184291 - 1185775 | 55469.9 |
| hypothetical protein | MSI_10220 | Not Available | Negative | 1185777 - 1186265 | 18054.5 |
| atpase component of abc transporter | MSI_10230 | Not Available | Negative | 1186407 - 1188059 | 62585.3 |
| glutamate synthase, nadh/nadph, small subunit | MSI_10240 | Not Available | Negative | 1188289 - 1189884 | 57617.4 |
| glutamate synthase domain 2 | MSI_10250 | Not Available | Negative | 1189997 - 1194535 | 166457.0 |
| oah/oas sulfhydrylase | MSI_10260 | Not Available | Positive | 1194812 - 1196095 | 46041.4 |
| asparagine synthase (glutamine-hydrolyzing) | MSI_10270 | Not Available | Negative | 1196179 - 1197933 | 66084.4 |
| na+-dependent transporter of the snf family | MSI_10280 | Not Available | Negative | 1198225 - 1199622 | 51353.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
