Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-lys | Not Available | Not Available | Positive | 1161949 - 1162024 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 1162050 - 1162129 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1162168 - 1162242 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1162275 - 1162349 | Not Available |
| trigger factor | MSI_10030 | Not Available | Positive | 1162454 - 1163803 | 50803.4 |
| atp-dependent clp protease, proteolytic subunit clpp | MSI_10040 | Not Available | Positive | 1163963 - 1164562 | 22001.3 |
| endopeptidase clp atp-binding regulatory subunit (clpx) | MSI_10050 | Not Available | Positive | 1164586 - 1165860 | 46217.9 |
| superfamily ii dna and rna helicase | MSI_10060 | Not Available | Negative | 1165988 - 1167133 | 43016.7 |
| glycosyltransferase | MSI_10070 | Not Available | Positive | 1167163 - 1168284 | 41485.0 |
| recf/recn/smc n terminal domain-containing protein | MSI_10080 | Not Available | Positive | 1168496 - 1171402 | 110517.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
