Kingdom
Pseudomonadati
Phylum
Spirochaetota
Class
Spirochaetia
Order
Spirochaetales
Family
Treponemataceae
Genus
Treponema
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Spirochaetota |
| Class | Spirochaetia |
| Order | Spirochaetales |
| Family | Treponemataceae |
| Genus | Treponema |
| Species | Treponema sp. JC4 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Spirilla |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
891278 bp
Thymine Count
917610 bp
Guanine Count
615445 bp
Cytosine Count
607707 bp
Genome Length
3032045 bp
Protein-coding Genes
2570 genes
Non-Coding Genes
43 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pgap1-like protein | MSI_00900 | Not Available | Negative | 94740 - 95549 | 28838.3 |
| putative phosphatase | MSI_00910 | Not Available | Negative | 95742 - 96407 | 24667.8 |
| iron only hydrogenase large subunit, c-terminal domain-containing protein | MSI_00920 | Not Available | Negative | 96419 - 97894 | 54114.4 |
| diguanylate cyclase (ggdef) domain-containing protein | MSI_00930 | Not Available | Positive | 97999 - 99858 | 70738.9 |
| nad/fad-utilizing enzyme involved in cell division | MSI_00940 | Not Available | Positive | 99890 - 101980 | 77167.2 |
| anti-anti-sigma factor | MSI_00950 | Not Available | Positive | 102081 - 102644 | 20761.3 |
| alpha-n-acetylgalactosaminidase | MSI_00960 | Not Available | Negative | 102604 - 103656 | 39558.5 |
| methylase involved in ubiquinone/menaquinone biosynthesis | MSI_00970 | Not Available | Negative | 103653 - 104435 | 29742.4 |
| adenosine deaminase | MSI_00980 | Not Available | Negative | 104462 - 105490 | 38852.1 |
| oligoendopeptidase f | MSI_00990 | Not Available | Negative | 105549 - 107351 | 68820.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
