Aggregatibacter actinomycetemcomitans RhAA1

Gram-negativeRodNon-motileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pasteurellales

Family

Pasteurellaceae

Genus

Aggregatibacter

Description

Aggregatibacter actinomycetemcomitans RhAA1 is a Gram-negative, rod-shaped bacterium classified as a nonsporulating, facultative anaerobe. This microbe thrives optimally at 37.0°C, which corresponds to the average human body temperature, suggesting a possible adaptation to a host-associated lifestyle. As a chemoheterotroph, Aggregatibacter actinomycetemcomitans RhAA1 derives its energy from organic compounds, which aligns with its habitat within the host gut. The presence of this bacterium in the gut environment may indicate its role in the complex microbial community that contributes to the host's digestion and metabolism. Its facultative anaerobic nature allows it to survive in both oxygen-rich and oxygen-poor conditions, further enhancing its adaptability within the diverse gut ecosystem. These traits suggest that Aggregatibacter actinomycetemcomitans RhAA1 may play a role in metabolic processes that are essential for the host's health, potentially influencing nutrient absorption and immunity. Understanding the specific interactions of this bacterium within the gut microbiome could provide insights into its contributions to host physiology and overall gut health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPasteurellales
FamilyPasteurellaceae
GenusAggregatibacter
SpeciesAggregatibacter actinomycetemcomitans
StrainRhAA1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Aggregatibacter actinomycetemcomitans RhAA1
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHost gut
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Aggregatibacter actinomycetemcomitans RhAA1


Gene Summary

Adenine Count

615110 bp

Thymine Count

620353 bp

Guanine Count

504743 bp

Cytosine Count

492841 bp

Genome Length

2233070 bp

Protein-coding Genes

2027 genes

Non-Coding Genes

175 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Deoxycytidylate deaminaseRHAA1_04226Not Available+870125 - 87065219243.2
AttrNot AvailableNot Available+879269 - 879286Not Available
Hypothetical proteinRHAA1_05108Not Available-1046989 - 10472048263.68
Deoxyribonucleoside 5'-monophosphate phosphataseRHAA1_05113Not Available-1047207 - 104778221717.3
AttlNot AvailableNot Available+1047739 - 1047750Not Available
Hypothetical proteinRHAA1_05118Not Available-1047786 - 104834621958.7
hypothetical proteinRHAA1_05123Not Available-1048355 - 104873214407.0
hypothetical proteinRHAA1_05128Not Available-1048776 - 104914714424.7
hypothetical proteinRHAA1_05133Not Available-1049149 - 10493136036.23
hypothetical proteinRHAA1_05138Not Available-1049323 - 10495147347.49

Displaying genes 21 – 30 of 2202 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

14 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000277keto-L-sorboseC6H12O6Chemical structure of keto-L-sorboseNot available
Average180.1559Da
Monoisotopic180.0633881Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0002759dTDP-beta-L-rhamnoseC16H24N2O15P2Not availableNot available
Average546.316Da
Monoisotopic546.066289237Da
BASm0002812aldehydo-D-glucose 6-phosphateC6H13O9PChemical structure of aldehydo-D-glucose 6-phosphateNot available
Average260.1358Da
Monoisotopic260.0297185Da
BASm0002846GDP-6-deoxy-alpha-D-taloseC16H23N5O15P2Chemical structure of GDP-6-deoxy-alpha-D-taloseNot available
Average587.329Da
Monoisotopic587.0676862Da
BASm0003091GDP-4-dehydro-alpha-D-rhamnoseC16H21N5O15P2Chemical structure of GDP-4-dehydro-alpha-D-rhamnoseNot available
Average585.313Da
Monoisotopic585.052036152Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0004884dTDP-6-deoxy-beta-L-taloseC16H26N2O15P2Chemical structure of dTDP-6-deoxy-beta-L-taloseNot available
Average548.3296Da
Monoisotopic548.0808412Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da

Displaying 1–10 of 14 metabolites