Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoglucosamine mutase | HMPREF9695_03245 | Not Available | - | 3422328 - 3423677 | 48526.7 |
| hypothetical protein | HMPREF9695_03246 | Not Available | - | 3423909 - 3424085 | 6345.23 |
| hypothetical protein | HMPREF9695_03247 | Not Available | - | 3424145 - 3424309 | 6085.08 |
| hypothetical protein | HMPREF9695_03248 | Not Available | + | 3424397 - 3425572 | 42585.8 |
| hypothetical protein | HMPREF9695_03249 | Not Available | - | 3425810 - 3426091 | 10248.3 |
| shikimate dehydrogenase | HMPREF9695_03250 | Not Available | - | 3426191 - 3427024 | 29423.2 |
| sulfate permease | HMPREF9695_03251 | Not Available | - | 3427102 - 3428817 | 59551.6 |
| hypothetical protein | HMPREF9695_03252 | Not Available | - | 3428859 - 3429098 | 8232.96 |
| translation elongation factor g | HMPREF9695_03253 | Not Available | - | 3429302 - 3431353 | 73557.5 |
| hypothetical protein | HMPREF9695_03254 | Not Available | - | 3431663 - 3432145 | 16064.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
