Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3'(2'),5'-bisphosphate nucleotidase | HMPREF9695_03187 | Not Available | + | 3359654 - 3360481 | 28768.4 |
| hypothetical protein | HMPREF9695_03188 | Not Available | - | 3360475 - 3360972 | 18026.2 |
| hypothetical protein | HMPREF9695_03189 | Not Available | + | 3361095 - 3361664 | 19921.9 |
| hypothetical protein | HMPREF9695_03190 | Not Available | + | 3361811 - 3363112 | 47826.9 |
| Trna-val | Not Available | Not Available | + | 3363234 - 3363308 | Not Available |
| hypothetical protein | HMPREF9695_03191 | Not Available | + | 3363372 - 3365072 | 62508.6 |
| hypothetical protein | HMPREF9695_03192 | Not Available | - | 3365087 - 3365248 | 5458.66 |
| hypothetical protein | HMPREF9695_03193 | Not Available | - | 3365402 - 3365620 | 7830.43 |
| hypothetical protein | HMPREF9695_03194 | Not Available | - | 3365697 - 3367241 | 54216.0 |
| hypothetical protein | HMPREF9695_03195 | Not Available | + | 3367542 - 3368111 | 20719.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
