Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase | HMPREF9695_02610 | Not Available | + | 2762756 - 2764111 | 48100.1 |
| 3-oxoadipate enol-lactonase | HMPREF9695_02611 | Not Available | + | 2764137 - 2764919 | 28443.4 |
| 4-carboxymuconolactone decarboxylase | HMPREF9695_02612 | Not Available | + | 2764928 - 2765320 | 14664.5 |
| hypothetical protein | HMPREF9695_02613 | Not Available | - | 2765293 - 2765826 | 18897.1 |
| hypothetical protein | HMPREF9695_02614 | Not Available | - | 2766108 - 2766269 | 5580.23 |
| hypothetical protein | HMPREF9695_02615 | Not Available | + | 2766505 - 2767419 | 32769.4 |
| hypothetical protein | HMPREF9695_02616 | Not Available | + | 2767428 - 2768768 | 47992.9 |
| hypothetical protein | HMPREF9695_02617 | Not Available | + | 2768768 - 2769604 | 30601.0 |
| hypothetical protein | HMPREF9695_02618 | Not Available | + | 2769601 - 2770332 | 26321.2 |
| hypothetical protein | HMPREF9695_02619 | Not Available | + | 2770332 - 2770694 | 13750.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
