Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | HMPREF9695_02434 | Not Available | - | 2593749 - 2594306 | 20508.7 |
| hypothetical protein | HMPREF9695_02435 | Not Available | - | 2594427 - 2595137 | 25441.3 |
| czca family heavy metal efflux pump | HMPREF9695_02436 | Not Available | - | 2595211 - 2598408 | 115732.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF9695_02437 | Not Available | - | 2598405 - 2599820 | 49717.9 |
| hypothetical protein | HMPREF9695_02438 | Not Available | - | 2599820 - 2600224 | 14244.4 |
| hypothetical protein | HMPREF9695_02439 | Not Available | - | 2600322 - 2600672 | 12488.3 |
| hypothetical protein | HMPREF9695_02440 | Not Available | - | 2601339 - 2602490 | 42954.2 |
| hypothetical protein | HMPREF9695_02441 | Not Available | - | 2602761 - 2603060 | 10629.2 |
| hypothetical protein | HMPREF9695_02442 | Not Available | - | 2603122 - 2603613 | 17884.3 |
| hypothetical protein | HMPREF9695_02443 | Not Available | - | 2603626 - 2605011 | 50946.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
