Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| czca family heavy metal efflux pump | HMPREF9695_02424 | Not Available | - | 2582112 - 2585318 | 114920.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF9695_02425 | Not Available | - | 2585372 - 2586316 | 33913.7 |
| hypothetical protein | HMPREF9695_02426 | Not Available | - | 2586313 - 2587590 | 46053.0 |
| hypothetical protein | HMPREF9695_02427 | Not Available | - | 2587647 - 2588021 | 13616.6 |
| signal peptidase ii | HMPREF9695_02428 | Not Available | - | 2588205 - 2588681 | 17541.6 |
| hypothetical protein | HMPREF9695_02429 | Not Available | - | 2588714 - 2589442 | 25221.8 |
| heavy metal translocating p-type atpase | HMPREF9695_02430 | Not Available | - | 2589505 - 2592051 | 88749.4 |
| hypothetical protein | HMPREF9695_02431 | Not Available | + | 2592117 - 2592581 | 17151.6 |
| hypothetical protein | HMPREF9695_02432 | Not Available | - | 2592730 - 2592996 | 9460.42 |
| hypothetical protein | HMPREF9695_02433 | Not Available | - | 2593111 - 2593752 | 22640.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
