Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| heavy metal translocating p-type atpase | HMPREF9695_02414 | Not Available | - | 2569135 - 2571306 | 75231.7 |
| hypothetical protein | HMPREF9695_02415 | Not Available | - | 2571427 - 2571885 | 16595.8 |
| hypothetical protein | HMPREF9695_02416 | Not Available | - | 2571914 - 2572288 | 12610.3 |
| czca family heavy metal efflux pump | HMPREF9695_02417 | Not Available | - | 2572303 - 2575494 | 114724.0 |
| efflux transporter, rnd family, mfp subunit | HMPREF9695_02418 | Not Available | - | 2575600 - 2576553 | 33806.6 |
| hypothetical protein | HMPREF9695_02419 | Not Available | - | 2576550 - 2577824 | 45688.4 |
| hypothetical protein | HMPREF9695_02420 | Not Available | - | 2578463 - 2579062 | 22148.1 |
| flagellar basal-body rod protein flgf | HMPREF9695_02421 | Not Available | - | 2579064 - 2579792 | 25545.2 |
| hypothetical protein | HMPREF9695_02422 | Not Available | - | 2581194 - 2581352 | 5943.42 |
| hypothetical protein | HMPREF9695_02423 | Not Available | - | 2581744 - 2582115 | 12736.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
