Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| p-type conjugative transfer protein trbg | HMPREF9695_02404 | Not Available | + | 2562761 - 2563741 | 36046.2 |
| hypothetical protein | HMPREF9695_02405 | Not Available | + | 2563735 - 2564925 | 42193.3 |
| hypothetical protein | HMPREF9695_02406 | Not Available | + | 2564937 - 2565167 | 8411.39 |
| hypothetical protein | HMPREF9695_02407 | Not Available | - | 2565164 - 2566093 | 34423.6 |
| hypothetical protein | HMPREF9695_02408 | Not Available | - | 2566090 - 2566218 | 4836.98 |
| cation diffusion facilitator family transporter | HMPREF9695_02409 | Not Available | - | 2566218 - 2567117 | 32022.7 |
| hypothetical protein | HMPREF9695_02410 | Not Available | - | 2567120 - 2567977 | 31915.4 |
| hypothetical protein | HMPREF9695_02411 | Not Available | - | 2567978 - 2568469 | 17782.3 |
| hypothetical protein | HMPREF9695_02412 | Not Available | - | 2568466 - 2568750 | 10256.6 |
| hypothetical protein | HMPREF9695_02413 | Not Available | - | 2568770 - 2569084 | 12213.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
