Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rlua family pseudouridine synthase | HMPREF9695_02315 | Not Available | - | 2474106 - 2475332 | 45415.9 |
| hypothetical protein | HMPREF9695_02316 | Not Available | - | 2475421 - 2476125 | 25237.7 |
| hypothetical protein | HMPREF9695_02317 | Not Available | - | 2476122 - 2477462 | 49139.6 |
| protease do | HMPREF9695_02318 | Not Available | - | 2477650 - 2479044 | 48799.0 |
| hypothetical protein | HMPREF9695_02319 | Not Available | - | 2479104 - 2479529 | 16031.5 |
| zinc-binding alcohol dehydrogenase | HMPREF9695_02320 | Not Available | + | 2479654 - 2480667 | 36002.5 |
| hypothetical protein | HMPREF9695_02321 | Not Available | - | 2481004 - 2482545 | 53688.1 |
| hypothetical protein | HMPREF9695_02322 | Not Available | + | 2482869 - 2483423 | 20643.9 |
| hypothetical protein | HMPREF9695_02323 | Not Available | - | 2483427 - 2484581 | 41886.4 |
| hypothetical protein | HMPREF9695_02324 | Not Available | - | 2484842 - 2485636 | 27722.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
