Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Afipia broomeae ATCC 49717
Accession NumberAGWX00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protocatechuate 3,4-dioxygenase, alpha subunit | HMPREF9695_00451 | Not Available | + | 470376 - 470963 | 20988.7 |
| hypothetical protein | HMPREF9695_00452 | Not Available | + | 471229 - 472482 | 46226.9 |
| hypothetical protein | HMPREF9695_00453 | Not Available | + | 472482 - 472805 | 11291.4 |
| hypothetical protein | HMPREF9695_00454 | Not Available | + | 472889 - 473650 | 26236.7 |
| hypothetical protein | HMPREF9695_00455 | Not Available | + | 473647 - 475101 | 52388.5 |
| pcar/pcau/pobr family beta-ketoadipate pathway transcriptional regulator | HMPREF9695_00456 | Not Available | - | 475111 - 475941 | 29707.1 |
| hypothetical protein | HMPREF9695_00457 | Not Available | + | 476137 - 477009 | 30341.4 |
| hypothetical protein | HMPREF9695_00458 | Not Available | + | 477002 - 478039 | 36246.6 |
| hypothetical protein | HMPREF9695_00459 | Not Available | + | 478036 - 478863 | 29819.2 |
| hypothetical protein | HMPREF9695_00460 | Not Available | + | 478860 - 479678 | 29504.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
