Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_03315 | Not Available | + | 3487728 - 3487901 | 5883.67 |
| protein-(glutamine-n5) methyltransferase, ribosomal protein l3-specific | HMPREF9695_03316 | Not Available | - | 3487820 - 3488842 | 36774.0 |
| hypothetical protein | HMPREF9695_03317 | Not Available | - | 3488842 - 3489306 | 16852.0 |
| molybdopterin converting factor, subunit 1 | HMPREF9695_03318 | Not Available | - | 3489314 - 3489565 | 9174.02 |
| cdp-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase | HMPREF9695_03319 | Not Available | - | 3489562 - 3490176 | 22504.2 |
| uvrabc system protein c | HMPREF9695_03320 | Not Available | - | 3490264 - 3492321 | 75654.4 |
| hypothetical protein | HMPREF9695_03321 | Not Available | + | 3492582 - 3493211 | 22173.0 |
| hypothetical protein | HMPREF9695_03322 | Not Available | - | 3493290 - 3493505 | 7792.54 |
| hypothetical protein | HMPREF9695_03323 | Not Available | - | 3493785 - 3494645 | 31594.1 |
| hypothetical protein | HMPREF9695_03324 | Not Available | - | 3494802 - 3495542 | 27024.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
