Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_03285 | Not Available | + | 3463672 - 3464103 | 16232.6 |
| hypothetical protein | HMPREF9695_03286 | Not Available | + | 3464321 - 3465205 | 31178.4 |
| hypothetical protein | HMPREF9695_03287 | Not Available | + | 3465379 - 3465792 | 14893.6 |
| hypothetical protein | HMPREF9695_03288 | Not Available | - | 3465898 - 3466377 | 17556.9 |
| hypothetical protein | HMPREF9695_03289 | Not Available | - | 3466386 - 3466844 | 16773.2 |
| hypothetical protein | HMPREF9695_03290 | Not Available | + | 3467031 - 3467330 | 11249.2 |
| gtp-binding protein ychf | HMPREF9695_03291 | Not Available | - | 3467498 - 3468595 | 39544.3 |
| peptidyl-trna hydrolase | HMPREF9695_03292 | Not Available | - | 3468718 - 3469332 | 22151.5 |
| 50s ribosomal protein l25 | HMPREF9695_03293 | Not Available | - | 3469354 - 3470079 | 25006.1 |
| hypothetical protein | HMPREF9695_03294 | Not Available | - | 3470265 - 3470456 | 6855.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
