Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 1-acylglycerol-3-phosphate o-acyltransferase | HMPREF9695_03265 | Not Available | + | 3442005 - 3442850 | 30413.1 |
| hypothetical protein | HMPREF9695_03266 | Not Available | + | 3442862 - 3443803 | 34653.4 |
| hypothetical protein | HMPREF9695_03267 | Not Available | - | 3443915 - 3445156 | 43296.9 |
| hypothetical protein | HMPREF9695_03268 | Not Available | - | 3445159 - 3446682 | 54635.1 |
| hypothetical protein | HMPREF9695_03269 | Not Available | - | 3447109 - 3447804 | 26032.1 |
| hypothetical protein | HMPREF9695_03270 | Not Available | - | 3447871 - 3448575 | 26566.0 |
| tat (twin-arginine translocation) pathway signal sequence | HMPREF9695_03271 | Not Available | + | 3448827 - 3449939 | 39871.8 |
| hypothetical protein | HMPREF9695_03272 | Not Available | + | 3449975 - 3450577 | 22126.3 |
| hypothetical protein | HMPREF9695_03273 | Not Available | - | 3450758 - 3452740 | 72463.2 |
| uvrabc system protein b | HMPREF9695_03274 | Not Available | + | 3452773 - 3455742 | 109738.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
