Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_03216 | Not Available | - | 3390374 - 3391219 | 28890.0 |
| hypothetical protein | HMPREF9695_03217 | Not Available | - | 3391407 - 3393032 | 59718.7 |
| hypothetical protein | HMPREF9695_03218 | Not Available | - | 3393328 - 3394653 | 47823.1 |
| hypothetical protein | HMPREF9695_03219 | Not Available | - | 3394925 - 3395218 | 10522.7 |
| Trna-glu | Not Available | Not Available | + | 3395277 - 3395351 | Not Available |
| hypothetical protein | HMPREF9695_03220 | Not Available | + | 3395572 - 3396570 | 37632.1 |
| hypothetical protein | HMPREF9695_03221 | Not Available | - | 3396548 - 3396814 | 9228.37 |
| rlua family pseudouridine synthase | HMPREF9695_03222 | Not Available | + | 3396879 - 3397886 | 36152.1 |
| rna polymerase sigma-32 factor | HMPREF9695_03223 | Not Available | + | 3398105 - 3399004 | 34032.8 |
| hypothetical protein | HMPREF9695_03224 | Not Available | + | 3399263 - 3400270 | 35464.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
