Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_03196 | Not Available | + | 3368255 - 3369067 | 30653.7 |
| isovaleryl-coa dehydrogenase | HMPREF9695_03197 | Not Available | - | 3369191 - 3370363 | 42338.8 |
| pas domain s-box protein | HMPREF9695_03198 | Not Available | - | 3370577 - 3372058 | 53511.0 |
| hypothetical protein | HMPREF9695_03199 | Not Available | + | 3372290 - 3373561 | 48614.8 |
| hypothetical protein | HMPREF9695_03200 | Not Available | + | 3373635 - 3374900 | 48838.4 |
| hypothetical protein | HMPREF9695_03201 | Not Available | + | 3374918 - 3375355 | 15132.5 |
| hypothetical protein | HMPREF9695_03202 | Not Available | + | 3375352 - 3376518 | 43038.4 |
| hypothetical protein | HMPREF9695_03203 | Not Available | + | 3376753 - 3377877 | 40176.2 |
| hypothetical protein | HMPREF9695_03204 | Not Available | + | 3377874 - 3378725 | 30673.7 |
| hypothetical protein | HMPREF9695_03205 | Not Available | - | 3378832 - 3379629 | 28158.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
