Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dethiobiotin synthetase | HMPREF9695_03167 | Not Available | - | 3339195 - 3339833 | 22887.7 |
| 8-amino-7-oxononanoate synthase | HMPREF9695_03168 | Not Available | - | 3339830 - 3340960 | 40299.0 |
| aspartate 1-decarboxylase | HMPREF9695_03169 | Not Available | - | 3341015 - 3341362 | 12633.3 |
| hypothetical protein | HMPREF9695_03170 | Not Available | - | 3341454 - 3342575 | 38946.5 |
| flagellar biosynthesis protein flha | HMPREF9695_03171 | Not Available | + | 3342984 - 3345116 | 75422.5 |
| hypothetical protein | HMPREF9695_03172 | Not Available | + | 3345417 - 3345626 | 7121.72 |
| hypothetical protein | HMPREF9695_03173 | Not Available | - | 3345759 - 3346754 | 34590.3 |
| sigma-70 family rna polymerase sigma factor | HMPREF9695_03174 | Not Available | - | 3346756 - 3347304 | 20730.2 |
| flagellar export protein flij | HMPREF9695_03175 | Not Available | - | 3347578 - 3347997 | 16145.2 |
| flagellar protein export atpase flii | HMPREF9695_03176 | Not Available | - | 3348104 - 3349429 | 47601.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
