Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_03118 | Not Available | - | 3288685 - 3289410 | 27203.9 |
| acetyl coenzyme a synthetase (adp forming), alpha domain-containing protein | HMPREF9695_03119 | Not Available | + | 3289705 - 3291873 | 76041.4 |
| hypothetical protein | HMPREF9695_03120 | Not Available | + | 3291964 - 3292815 | 31284.8 |
| glyoxylate carboligase | HMPREF9695_03121 | Not Available | + | 3292992 - 3294791 | 65442.0 |
| hydroxypyruvate isomerase | HMPREF9695_03122 | Not Available | + | 3294819 - 3295604 | 29089.8 |
| 2-hydroxy-3-oxopropionate reductase | HMPREF9695_03123 | Not Available | + | 3295629 - 3296516 | 30513.2 |
| hypothetical protein | HMPREF9695_03124 | Not Available | - | 3296725 - 3297492 | 26789.2 |
| histidinol dehydrogenase 2 | HMPREF9695_03125 | Not Available | - | 3297489 - 3298796 | 47352.8 |
| hypothetical protein | HMPREF9695_03126 | Not Available | - | 3298812 - 3299762 | 34785.4 |
| hypothetical protein | HMPREF9695_03127 | Not Available | - | 3299836 - 3300540 | 25835.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
