Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_03108 | Not Available | - | 3276676 - 3277119 | 15947.4 |
| succinate-coa ligase, alpha subunit | HMPREF9695_03109 | Not Available | - | 3277673 - 3278557 | 30065.4 |
| succinyl-coa ligase | HMPREF9695_03110 | Not Available | - | 3278557 - 3279759 | 42376.4 |
| hypothetical protein | HMPREF9695_03111 | Not Available | - | 3279950 - 3281242 | 46700.5 |
| hypothetical protein | HMPREF9695_03112 | Not Available | - | 3281496 - 3283007 | 53114.8 |
| hypothetical protein | HMPREF9695_03113 | Not Available | - | 3283035 - 3283541 | 18353.8 |
| hypothetical protein | HMPREF9695_03114 | Not Available | - | 3283606 - 3284619 | 36307.7 |
| hypothetical protein | HMPREF9695_03115 | Not Available | - | 3285144 - 3285365 | 7774.56 |
| formyl-coenzyme a transferase | HMPREF9695_03116 | Not Available | - | 3285532 - 3286812 | 46477.9 |
| oxalyl-coa decarboxylase | HMPREF9695_03117 | Not Available | - | 3286905 - 3288647 | 61487.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
