Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_03038 | Not Available | - | 3219905 - 3221377 | 52897.8 |
| hypothetical protein | HMPREF9695_03039 | Not Available | - | 3221374 - 3222867 | 54285.3 |
| hypothetical protein | HMPREF9695_03040 | Not Available | - | 3222864 - 3224360 | 52965.2 |
| glycine oxidase thio | HMPREF9695_03041 | Not Available | + | 3224713 - 3225747 | 37754.2 |
| thiamine biosynthesis protein this | HMPREF9695_03042 | Not Available | + | 3225738 - 3225935 | 7199.48 |
| thiazole synthase | HMPREF9695_03043 | Not Available | + | 3226107 - 3226889 | 27828.5 |
| thiamine-phosphate pyrophosphorylase | HMPREF9695_03044 | Not Available | + | 3226876 - 3227484 | 21781.0 |
| phosphomethylpyrimidine synthase | HMPREF9695_03045 | Not Available | + | 3227508 - 3229439 | 70544.5 |
| hypothetical protein | HMPREF9695_03046 | Not Available | - | 3229454 - 3230197 | 29005.5 |
| hypothetical protein | HMPREF9695_03047 | Not Available | + | 3230566 - 3231120 | 20489.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
