Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia broomeae |
| Strain | ATCC 49717 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1015315 bp
Thymine Count
1018355 bp
Guanine Count
1613308 bp
Cytosine Count
1613020 bp
Genome Length
5259998 bp
Protein-coding Genes
5042 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9695_03018 | Not Available | - | 3195200 - 3195610 | 15191.4 |
| ribosomal rna small subunit methyltransferase h | HMPREF9695_03019 | Not Available | - | 3195612 - 3196715 | 39556.0 |
| hypothetical protein | HMPREF9695_03020 | Not Available | + | 3197231 - 3198004 | 27660.3 |
| sigma-70 family rna polymerase sigma factor | HMPREF9695_03021 | Not Available | - | 3198001 - 3199254 | 45392.8 |
| hypothetical protein | HMPREF9695_03022 | Not Available | - | 3199279 - 3199632 | 12891.2 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9695_03023 | Not Available | + | 3200384 - 3201592 | 43607.1 |
| hypothetical protein | HMPREF9695_03024 | Not Available | - | 3201609 - 3203663 | 75532.0 |
| hypothetical protein | HMPREF9695_03025 | Not Available | + | 3203773 - 3204609 | 30385.0 |
| hypothetical protein | HMPREF9695_03026 | Not Available | + | 3204674 - 3205513 | 30161.1 |
| hypothetical protein | HMPREF9695_03027 | Not Available | - | 3205564 - 3207360 | 64974.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
